We offer free pickup from all NIH
locations, USDA, FDA, EPA, SAIC and
other local customers for all orders
priced at $450 or higher.
Genotyping
Clongen Laboratories offers
decades of molecular biology
expertise for rodent genotyping. Confirmation
of the presence or absence of
specific genes in transgenic
and knockout animals is accomplished
using PCR, RT-PCR, Southern
blotting and Slot blot assays. Existing
protocols can be used or new
assays can be optimized and
adapted for new genotyping submissions.
Prices (Effective January 1,
2006)
There is a one time setup
fee for assay transfer of new
protocols and $22 for each test
thereafter. If the protocol
is established and can be provided
by the client, a one time $125
is required and $22 for each
assay thereafter.
Discount Table
:
Number
of Tests per Month
Price
1 - 100
$22
per tail
101 - 500
$19
per tail
> 500
$15
per tail
> 2000
Call
PCR
Testing
DNA extracted from tail tissue clippings
is used as the target template and
the proper primers specific for the
detection of either the transgene
or a knockout gene in the PCR reaction
mixture will result in the amplification
of the expected size fragments. Clongen
Laboratories can determine the genotype
of animals within your colony. The
resulting amplification of primer-specified
target DNA allows for the determination
of the genetic nature of the tested
animals with respect to gene insertion
or deletion - and therefore their
genotype.
Reporting of Results and Sample Submission:
PCR results are reported to the customer
within 5-14 days following receipt
of samples. Assay transfer of new
assays may require an additional week.
The most desirable samples for genotyping
are tail snips. Tail snips should
be collected and immersed in 70% ethanol
and refrigerated (4C) prior to shipping.
(Other tissues, such as toe clips,
ear punches, muscle and brain tissue
may also be used.) Samples should
be shipped overnight on ice packs.
Please contact Clongen Laboratories
prior to shipping any samples.
Southern
Blot
Hybridization differs from PCR in
that the target DNA is not amplified. The
target sequence is detected using
a signal amplification technology
where a labeled probe hybridizes to
the target and following stringent
washing steps, the probe/target complex
is detected using color development. Southern
blotting requires digestion of the
genomic DNA with restriction enzymes
to produce fragments of various sizes.
Those fragments are run on an agarose
gel and blotted onto a membrane. The
membrane is hybridized with a probe
designed to complement the target
DNA. Following development of the
signal or image recording, the resulting
banding pattern is analyzed to determine
the genotype or carrier status of
animals within the tested colony.
Reporting of Results and Sample Submission:
Southern Blot results are reported
to the customer within 8-20 days following
receipt of samples. However, transfer
and validation of new protocols may
require additional time.
Tail snips are collected and immersed
in 70% ethanol and refrigerated (4C)
prior to shipments. (Other tissue
may also be used.) Samples should
be shipped overnight on ice packs.
Please contact Clongen Laboratories
prior to shipping any samples.
Slot
Blot
Slot Blot Slot blots are the least
comprehensive of the genotyping assays.
While they determine the presence
or absence of a transgene for transgenic
mutant models (carrier versus wild-type
determinations), they do not provide
added confirmation of an interpretable
banding pattern. Although hybridization
is the method of detection for both
Southern and Slot blots, DNA is applied
directly to one small area on a membrane,
not separated by size in Slot blotting.
Transgenic model genotype information
will be reported simply as carrier
or wild type status.
Reporting of Results and Sample Submission:
Slot Blot results are reported to
the customer within 8-20 days following
receipt of samples. However, transfer
and validation of new protocols may
require additional time.
Tail snips are collected and immersed
in 70% ethanol and refrigerated (4C)
prior to shipments. (Other tissue
may also be used.) Samples should
be shipped overnight on ice packs.
Please contact Clongen Laboratories
prior to shipping any samples.
Western
Blotting
We offer Western Blotting Services
for any protein product. Please contact
customer support for details on your
specific project needs and custom
pricing.
Protocol numbers:
PCR: GT101
Slot Blot: GT102
Southern Blotting:
GT103
Please contact Clongen Laboratories prior to shipping any samples.